Faculty of Chemisty Publications in 2005
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2015, April 3 - 10:08amPUBLIKACJE W CZASOPISMACH Z LISTY FILADELFIJSKIEJ:
- Bielicka A., Bojanowska I., Wiśniewski A. Two faces of chromium - pollutant and bioelement, Polish J. Environ. Stud., 2005, 14, (1), 5-10.
- Bielicka A., Bojanowska I., Wiśniewski A. Sequential extraction of chromium from galvanic wastewater sludge, Polish J. Environ. Stud., 2005, 14(2), 145-148.
- Stepnowski P., Storoniak P. Lipophilicity and metabolic route prediction of imidazolium ionic liquids. Environ. Sci. Poll. Res., 2005, 12(4), 199-204.
- Siedlecka E.M., Stepnowski P. Phenols degradation by the Fenton reaction in the presence of chlorides and sulfates. Pol. J. Environ. Stud., 2005, 14(6), 823-828.
- Stepnowski P. Preliminary assessment of the sorption of some alkyl imidazolium cations as used in ionic liquids to soils and sediments. Aust. J. Chem., 2005, 58, 170-173.
- Stepnowski P., Mrozik W. Analysis of selected ionic liquid cations by ion exchange chromatography and reversed-phase high performance liquid chromatography. J Sep. Sci., 2005, 28(2), 149-154.
- Stepnowski P. Solid phase extraction of ionic liquids from environmental aqueous samples, Anal. Bioanal. Chem., 2005, 381(1), 189-193.
- Składanowski A.C., Stepnowski P., K. Kleszczyński K., Dmochowska B. AMP deaminase in vitro inhibition by xenobiotics. A potential molecular method for risk assessment of synthetic nitro- and polycyclic musks, imidazolium ionic liquids and N-glucopyranosyl ammonium salts. Environ. Toxicol. Pharmacol., 2005, 19(2), 291-296.
- Stepnowski P. Zaleska A. Comparison of different advanced oxidation processes for the degradation of room temperature ionic liquids, J. Photochem. Photobiol. A: Chemistry, 2005, 170, 45-50.
- Latała A., Stepnowski P., Nędzi M., Mrozik W. Marine toxicity assessment of imidazolium ionic liquids: acute effects on the Baltic algae Oocystis submarina and Cyclotella meneghiniana. Aquatic Toxicol., 2005, 73, 91-98.
- Pintea A., Varga A., Stepnowski P., Socaciu C., Culea M., Diehl H. Chromatographic analysis (HPLC, GC) of cartenol fatty acids esters in Physalis alkekengi and Hippophae rhamnoides. Phytochem. Anal., 2005, 16(3) 188-195.
- Jastorff B., Mölter K., Behrend P., Bottin-Weber U., Filser J., Heimers A., Ondruschka B., Ranke J., Schaefer M., Schröder H., Stark A., Stepnowski P., Stock F., Störmann R., Stolte S., Welz-Biermann U., Ziegert S., Thöming J. Progress in evaluation of risk potential of ionic liquids-basis for an eco-design of sustainable products. Green Chem. 7, 2005, 362-372.
- Anusiewicz I., Sobczyk M., Berdys-Kochańska J., Skurski P., Simons J. A theoretical model for indirect dissociative electron attachment. J. Phys. Chem. A, 2005, 109, 484.
- Sobczyk M., Skurski P., Simons J. Dissociative low-energy electron attachment to the C-S bond of H3CSCH3 influenced by coulomb stabilization, Adv. Quantum Chem., 2005, 48, 239-251.
- Sawicka A., Berdys-Kochańska J., Skurski P., Simons J. Low-energy (0.1 eV) electron attachment S-S bond cleavage assisted by Coulomb stabilization. Int. J. Quantum Chem., 2005, 102, 838.
- Sobczyk M., Anusiewicz I., Berdys-Kochańska J., Sawicka A., Skurski P., Simons J. Coulomb-assisted dissociative electron attachment: application to a model peptide. J. Phys. Chem. A, 2005, 109, 250.
- Anusiewicz I., Berdys-Kochańska J., Simons J., The electron attachment step in electron capture (ECD) and electron transfer dissociation (ETD). J. Phys. Chem. A, 2005, 109, 5801.
- Sawicka A., Skurski P., Simons J. Inverse potassium hydride. A theoretical study. J. Phys. Chem. A, 2005, 109, 922.
- Berdys-Kochańska J., Kruszewski J., Skurski P. Negatively charged Xanthine. Anions formed by canonical isomers. J. Phys. Chem. A, 2005, 109, 11407-11412.
- Anusiewicz I., Jasionowski M., Skurski P., Simons J. Backbone and side chain cleavages in electron detachment dissociation (EDD). J. Phys. Chem. A, 109, 11332-11337.
- Taniyasu S., Falandysz J., Świętojańska A., Flisak M., Horii Y., Hanari N., Yamashita N.: Clophen A 60 content of CBs, CNs, CDFs and CDDs after 2D-HPLC plus HRGC/LRMS and HRGC/HRMS separation and quantification. Journal of Environmental Science and Health, Part A -Toxic/Hazardous Substances and Environmental Engineering, 2005, 40A(1), 43 -61.
- Noma Y., Yamamoto T., Falandysz J., Gulkowska A., Jęcek L., Sakai S. : By-side impurities in chloronaphthalene mixtures of the Halowax series: all 135 chlorodibenzofurans. Journal of Environmental Science and Health, Part A -Toxic/Hazardous Substances and Environmental Engineering, 2005, 40A(1), 63-76.
- Noma Y., Yamamoto T., Falandysz J., Świętojańska A., Flisak, M., Sakai S.: By-side impurities in chloronaphthalene mixtures of the Halowax series: all 75 chlorodibenzo-p-dioxins. Journal of Environmental Science and Health, Part A -Toxic/Hazardous Substances and Environmental Engineering, 2005, 40A(1), 77-89.
- Puzyn T., Falandysz J.: Computational estimation of logarithm of n-octanol/air pertition coefficient and subcooled vapor pressures of 75 chloronaphthalene congeners. Atmospheric Environment, 2005, 39(3), 1439-1446.
- Falandysz J., Szymczyk-Kobrzyńska K., Brzostowski A., Zalewski K., Zasadowski A.: Concentrations of heavy metals in the tissues of red deer (Cervus elaphus) from the region of Warmia and Mazury in Poland. Food Additives and Contaminats, 2005, 22(2), 141-149.
- Horii Y., Kannan K., Petrick G., Gamo T., Falandysz J., Yamashita N. Congener-specific carbon isotopic analysis of technical PCB and PCN mixturesusing two dimensional gas chromatography-isotope ratio mass spectrometry. Environmental Science and Technology, 2005, 39 11) 4206-4212.
- Puzyn T., Falandysz J. Octanol/water partition coefficients of chloronaphthalenes. Journal of Environmental Science and Health, Part A -Toxic/Hazardous Substances and Environmental Engineering, 2005, 40A(9), 1651-1663.
- Falandysz J., Nose K., Mostrag A., Ishikawa Y., Noma Y., Sakai S. Chlorodibenzo-p-dioxins and chlorodibenzofurans in technical chlorobiphenyl formulations of Aroclor 1268, Chlorofen, and Clophen T 64. Journal of Environmental Science and Health, Part A -Toxic/Hazardous Substances and Environmental Engineering, 2005, 40A(9), 1665-1678.
- Taniyasu S., Kannan K., So M.K., Gulkowska A., Sinclair E., Okazawa T., Yamashita N. Analysis of fluorotelomer alcohols, fluorotelomer acids, and short- and long-chain perfluorinated acids in water and biota. Journal of Chromatography A, 2005, 1093, 89-97.
- Ishikawa Y., Falandysz J., Noma Y., Sakai S.: Chlorobiphenyl constituents of Aroclor 1268, Chlorofen, Clophen T 64, KC-600, and KC-1000 technical formulations. Journal of Environmental Science and Health, Part A -Toxic/Hazardous Substances and Environmental Engineering, 2005, 40A(12), 2171-2187.
- Kaliszan R., Bączek T., Cimochowska A., Juszczyk P., Wiśniewska K., Grzonka Z. Prediction of high-performance liquid chromatography retention of peptides with the use of quantitative structure-retention relationships. Proteomics, 2005, 5, 409-415.
- Stańczak P., Valensin D., Juszczyk P., Grzonka Z., Valensin G., Bernardi F., Molteni E., Gaggelli E., Kozłowski H. Fine tuning the structure of the Cu2+ complex with prion protein chicken repeats by proline isomerization. Chem. Comm., 2005, 3298-3300.
- Stańczak P., Valensin D., Juszczyk P., Grzonka Z., Migliorini C., Molteni E., Valensin G., Gaggelli E., Kozłowski H. Structure and stability of the CuII complexes with tandem repeats of the chicken prion. Biochemistry, 2005, 44, 12940-12954.
- Makowska J., Bagińska K., Kasprzykowski F., Villa J.A., Jagielska A., Liwo A., Chmurzyński L., Scheraga H.A. Interplay of charge distribution and conformation in peptides: comparison of the theory and experiment. Biopolymers (Peptide Science), 2005, 80, 214-224.
- Ossowski T., Zarzeczańska D., Zalewski L., Niedziałkowski P., Majewski R., Szymańska A. Synthesis of lysine derivatives containing aza-crown ethers and chromophoric unit. Tetrahedron Lett., 2005, 46, 1735-1738.
- Szabelski M., Rogiewicz M., Wiczk W., Fluorogenic peptide substrates containing benzoxazol-5-yl-alanine derivatives for kinetic assays of cysteine proteases. Anal. Biochem., 2005, 342, 20-27.
- Guzow K., Szabelski M., Karolczak J., Wiczk W. Solvatochromism of 3-[2-(aryl)benzoxazol-5-yl]alanine derivatives. J. Photochem. Photobiol. A: Chemistry, 2005, 170, 215-233.
- Guzow K., Zielińska J., Mazurkiewicz K., Karolczak J., Wiczk W. Influence of substituents in the phenyl ring on photophysical properties of, 3-[2-(phenyl)benzoxazol-5-yl]alanine derivatives, J. Photochem. Photobiol. A: Chemistry, 2005, 175, 57-68.
- Kowalik-Jankowska T., Rajewska A., Wiśniewska K., Grzonka Z., Jezierska, J. Coordination abilities of N-terminal fragments of α-synuclein towards copper(II) ions: A combined potentiometric and spectroscopic studies. J. Inorg. Biochem., 2005,99, 2282-2291.
- Mrozek J., Banecki B., Karolczak J., Wiczk W. Influence of the separation of the charged groups and aromatic ring on interaction of tyrosine and phenylalanine analogues and derivatives with cyclodextrin.Biophys. Chem., 2005, 116, 237-250.
- Guzow K., Rzeska A., Mrozek J., Karolczak J., Majewski R., Szabelski M., Ossowski T., Wiczk W. Photophysical properties of tyrosine and its simple derivatives in organic solvent studied by time-resolved fluorescence spectroscopy and global analysis. Photochem. Photobiol., 2005, 81, 697-704.
- Hamada H., Kameshima N., Szymańska A., Wegner K, Łankiewicz L., Shinohara H, Taki M., Sisido M. Position-specific incorporation of a highly photodurable and blue-laser excitable fluorescent amino acid into proteins for fluorescence sensing. Bioorg. Med. Chem., 2005, 13, 3379-3384.
- Budesinsky M., Ragnarsson U., Łankiewicz L., Grehn L., Slaninova J., Hlavacek J. Synthesis and utilization of 13C and 15N backbone-labeled proline: NMR study of synthesized oxytocin with back-bone labeled C-terminal tripeptide amide. Amino Acids, 2005, 29, 151-160.
- Wieczerzak E., Jankowska E., Rodziewicz-Motowidlo S., Giełdoń A., Łągiewka J., Grzonka Z., Abrahamson M., Grubb A., Brömme D. Novel azapeptide inhibitors of cathepsin B and K. Structural background to increased specificity for cathepsin B. J. Pept. Res., 2005, 66, Suppl. 1, 1-11.
- Milewska M., Skwierawska A., Guzow K., Śmigiel D., Wiczk W. 3-[2-(2-Quinoxalinyl)benzoxazol-5-yl]alanine derivative - a specific, fluoroionophore for Ni(II). Inorg. Chem. Commun., 2005, 8, 947-950.
- Guzow K., Milewska M., Wiczk W. Solvatochromism of 3-[2-(4-diphenylaminophenyl)benzoxazol-5-yl]alanine methyl ester. A new fluoroscence probe. Spectrochim. Acta. Part A., 2005, 61, 1133-1140.
- Bączek T., Marszałł M.P., Kaliszan, R. Walijewski Ł., Makowiecka W., Sparzak, Grzonka Z., Wiśniewska K., Juszczyk P. Behavior of peptides and computer-assisted optimization of peptides separations in a normal-phase thin-layer chromatography system with and without the addition of ionic liquid in the eluent. Biomed. Chromatogr., 2005, 19, 1-8.
- Juszczyk P., Kołodziejczyk A.S., Grzonka Z., Circular dichroism and aggregation studies of amyloid β(11-28) fragment and its, variants. Acta Biochim. Pol., 2005, 52, 425-431.
- Wieczerzak E., Drabik P., Abrahamson M., Grubb A. In search of selective inhibitors of cysteine protease, cathepsin K. Int. J. Peptide Res. Therapeutics (d. Lett. Peptide Sci.), 2005, 11, 203-209.
- Woźniak D., Szymańska A., Sikorski A., Konitz A., Lis T., (2R)-N-{3-[Bis(methylsulfanyl)methylene]amino-propionyl}bornane-10,2-sultam. Acta Cryst. E61, 2005, 0295-0297.
- A.M. Kłonkowski, I. Szałkowska, S. Lis, M. Pietraszkiewicz, Z. Hnatejko, A. Klukowska, U. Posset, Influence of Xerogel Matrices and Coligands on Luminescence Parameters in Materials with an Europium(III) Cryptat, J. Non-Cryst. Solids 351, 2047-2056 (2005),
- Kłonkowski A.M., Szałkowska I., Lis S., Pietraszkiewicz M., Hnatejko Z., Luminescent Materials Consisting of an Eu(III) Cryptate Complexed with Coligands and Entrapped in Xerogel Matrices, J. Lumin., 2005, 115, 122-130.
- Kłonkowski A.M., Szałkowska I., Functions of Eu3+ Ions in Materiale with CdS Nanoparticles and Oxide Matrices, Mater. Sci., 2005, 23, 253-260. 55.Łempicka E., Derdowska I., Kowalczyk W., Dawidowska O., Prahl A., Janecki M., Jasiński T., Trzeciak H.I., Lammek B. Analogues of arginine vasopressin modified in position 2 and 3 with conformationally constrained dipeptide fragments. J. Pept. Sci., 2005, 11, 91-96.
- Derdowska I., Prahl A., Kowalczyk W., Janecki M., Melhem S., Trzeciak H.I., Lammek B. Influence of enantiomers of 1-naphtylalanine in position 2 of VAVP and dVAVP on their pharmacological properties. Eur. J. Med. Chem., 2005, 40, 63-68.
- Sobolewski D., Kowalczyk W., Derdowska I., Slaninová J., Kaczmarek K., Zabrocki J., Lammek B. Analogues of arginine vasopressin (AVP) modified in the N-terminal part of the molecule with stereoisomers of 4-aminopyroglutamic acid., Pol. J. Chem., 2005, 79, 731-737.
- Sobolewski D., Kowalczyk W., Prahl A., Derdowska I., Slaninová J., Zabrocki J., Lammek B. Analogues of arginine vasopressin (AVP) and its agonist and antagonist modified in the N-terminal part of the molecule with l-β-homophenylalanine., J. Pept. Res., 2005, 65, 465-471.
- Dawidowska O., Prahl A., Wierzba T.H., Nowakowski L., Kowalczyk W., Slaninová J., Lammek B. New acylated bradykinin analogues: effect on rat blood pressure and rat uterus. J. Pept. Scie., 2005, 11, 436-439.
- Kowalczyk W., Prahl A., Dawidowska O., Derdowska I., Sobolewski D., Hartrodt B., Neubert K., Slaninová J., Lammek B. The influence of 1-aminocyclopentane-1-carboxylic acid at position 2 or 3 of AVP and its analogues on their pharmacological properties. J. Pept. Sci., 2005, 11, 584-588.
- Labudda Dawidowska O., Wierzba T.H., Prahl A., Kowalczyk W., Gawiński L., Plackowa M., Slaninová J., Lammek B. New bradykinin analogues modified in the C-terminal part with sterically restricted 1-aminocyclohexane-1-carboxylic acid. J. Med. Chem., 2005, 48, 8055-8059.
- Sikorska Trzepałka E., Ślusarz R., Lammek B. Conformational studies of two bradykinin antagonists by using two-dimensional NMR techniques and molecular dynamics simulations. J. Biomol. Struct. Dyn., 2005, 23, 125-134.
- Śmiech B., Kaźmierkiewicz R., Bujnicki J., Lammek B. Theoretical predictions of the impact of the trisubstituted pyrophosphate internucleotide bond on B DNA fragments. J. Mol. Struc.: THEOCHEM, 2005, 756, 63-71.
- Liberek B., Sikorski A., Konitz A. Synthesis, crystal structure, and high-resolution NMR spectroscopy of methyl 3-azido-2,3-dideoxy-4,6-di-O-p-tolylsulfonyl-α-D-xylo-hexopyranoside" Carbohydr. Res. 2005, 340, 143-147.
- Liberek B., Melcer A., Osuch A., Wakieć R., Milewski S., Wiśniewski A. N-Alkyl derivatives of 2-amino-2-deoxy-D-glucose., Carbohydr. Res., 2005, 340, 1876-1884.
- Liberek B. Synthesis and conformational studies on methyl 4-O-acetyl-3-azido-2,3,6-trideoxy-hex-5-enopyranosides of the L series., Carbohydr. Res., 2005, 340, 2039-2047.
- Dąbrowska A., Jacewicz D., Makowski M., Kozak A., Czaja M., Nowacki A., Wiśniewski A., Chmurzyński L. Determination of the protonation and deprotonation centres for isomers of methyl 3-azido-2,3-dideoxyhexopyranosides., Journal of Molecular Structure: THEOCHEM, 2005, 714, 1-6.
- Jankowska M., Madaj J. Glycosylation of allyl 2-acetamido-4,6-O-benzylidene-2-deoxy-α-D-glucopyranoside with bulky substituted glycosyl donors Carbohydr. Res., 2005, 340, 2048.
- Stawikowski M., Stawikowska R., Jaśkiewicz A., Zabłotna E., Rolka K. Examples of peptide-peptoid hybrid serine protease inhibitors based on the trypsin inhibitor SFTI-1 with complete protease resistance at P1-P1' reactive site, ChemBioChem, 2005, 6, 1-5.
- Kotlińska J., Rafalski P., Talarek S., Dylag T., Rolka K., Wichmann J., Silberring J. Is the nociceptin (NOP) receptor involved in attenuation of the expression of sensitization to morphine-induced hyperlocomotion in mice?, Behav. Pharmacol. 2005, 16, 101-106.
- Dąbrowska A, Jacewicz D., Łapińska A., Banecki B., Figurski A., Szkatuła M., Lehman J., Krajewski J., Kubasik-Juraniec J., Woźniak M., Chmurzyński L. "Pivotal participation of nitrogen dioxide in L-arginine induced acute necrotizing pancreatitis: protective role of superoxide scavenger 4-OH-TEMPO, BBRC (Biochem.Bioph.Res.Co.), 2005, 326, 313-320.
- Dąbrowska A, Jacewicz D., Makowska J., Makowski M., Chmurzyński L., Ab initio study of the energetics of protonation and deprotonation of the methyl 3-amino-2,3-dideoxy-hexopyranosides, J.Mol.Struct. (Theochem)., 2005, 718, 87-92.
- Jacewicz D., Banecki B., Dąbrowska A., Kolisz I., Woźniak M., Chmurzyński L., A stopped-flow study on the kinetics and mechanism of CO2 uptake by chromium(III) complexes with histamine and pyridoxamine., Trans.Met.Chem., 2005, 30, 209-216.
- Czaja M., Bagińska K., Kozak A., Makowski M., Chmurzyński L., Potentiometric investigations of molecular heteroconjugation equilibria of substituted phenol-n-butylamine systems in dimethyl sulfoxide, J.Chem.Thermodyn, 2005, 37, 778-782.
- Czaja M., Kozak A., Makowski M., Chmurzyński L., Potentiometric investigations of (acid + base) equilibria in (n-butylamine + acetic acid ) systems in binary (acetone + cyclohexane) solvent mixtures., J.Chem.Thermodyn., 2005, 37, 783-790.
- Kozak A., Czaja M., Chmurzyński L., Studies on (acid + base) equilibria in substituted (phenol + n-butylamine) systems in acetonitrile., J.Chem.Thermodyn., 2005, 37, 810-813.
- Makowska J., Makowski M., Gurzyński Ł., Chmurzyński L. Theoretical studies on acid-base interactions in the substituted 4-Nitropyridines and their N-oxides systems., J.Mol.Struct. (Theochem), 2005, 731, 193-199.
- Makowska J., Makowski M., Gurzyński Ł., Chmurzyński L. Ab initio studies of acid-base reactions in the substituted 4-nitropyridine N-oxide systems, J.Mol.Struct. (Theochem), 2005, 756, 1-9.
- Ebead Y., Wróblewska A., Krzymiński K., Rak J., Błażejowski J. NMR and DFT investigations of the substituent and solvent effect on amino-imino tautomerism in acridin-9-amines substituted at the exocyclic nitrogen atom., J. Phys. Org. Chem., 2005, 18, 870-879.
- Pivovarenko V.G., Wróblewska A., Błażejowski J. 2-[4-(Dimethylamino)phenyl]-3-hydroxy-4H-chromene-4-one: a H-bond-sensitive fluorescent probe for investigating binary mixtures of organic solvents., Anal. Chim. Acta, 2005, 545, 74-78.
- Wróblewska A., Reshetnyak O.V., Kovalchuk E.P., Pasichnyuk R.I, Błażejowski J. Origin and features of the electrochemiluminescence of luminol - experimental and theoretical investigations., J. Electroanal. Chem. 2005, 580, 41-49.
- Sikorski A., Krzymiński K., Konitz A., Błażejowski J. 2-Ethylphenyl acridine-9-carboxylate and 2,5-dimethylphenyl acridine-9-carboxylate, Acta Crystallogr. Sect C, 2005, 61, o50-o52.
- Ebead Y., Sikorski A., Krzymiński K., Lis T., Błażejowski J., 9-(2-Chloroethylamino)acridine monohydrate and its presursor 9-phenoxyacridine., Acta Crystallogr. Sect C, 2005, 61, o85-o87.
- Sikorski A., Krzymiński K., Konitz A., Błażejowski J. 9-(2,6-Dichlorophenoxycarbonyl)-10-methylacridinium trifluoromethanesulfonate and its precursor 2,6-dichlorophenyl acridine-9-carboxylate, Acta Crystallogr., Sect C 61, 2005, o227-o230.
- Sikorski A., Krzymiński K., Konitz A., Błażejowski J. 2,6-Dibromophenyl acridine-9-carboxylate, Acta Crystallogr., Sect E 61, 2005, o3112-o3114.
- Sikorski A., Krzymiński K., Konitz A., Błażejowski J. 9-(2,6-Dibromophenoxycarbonyl)-10-methylacridinium trifluoromethanesulfonate, Acta Crystallogr., Sect E 61, 2005, o2131-o2133.
- Sikorski A., Krzymiński K., Niziołek A., Błażejowski J. 9-(2,6-Difluorophenoxycarbonyl)-10-methylacridinium trifluoromethanesulfonate and its precursor 2,6-difluorophenyl acridine-9-carboxylate: C-H...O, C-F...π, S-O... π and π-π stacking interactions, Acta Crystallogr., Sect C 61, o690-o694 (2005).
- Sikorski A., Krzymiński K., Białońska A., Lis T., Błażejowski J. 2,6-Diiodophenyl acridine-9-carboxylate, Acta Crystallogr., Sect E 61, 2005, o4355-o4357.
- Niemirycz E., Kaczmarczyk A., Błażejowski J. Extractable organic halogens (EOX) in sediments from selected Polish rivers and lakes - a measure of the quality of the inland water environment, Chemosphere 61, 2005, 92-97.
- Kovalchuk E.P, Grynchyshyn I.V., Reshetnyak O.V., Gladyshevskyj R.Y., Błażejowski J. Oxidative condensation and chemiluminescence of 5-amino-2,3-dihydro-1,4-phtalazinedione. Eur. Polym. J., 2005, 41, 1315-1325.
- Dąbrowska, D. Jacewicz, A. Sikorski, L. Chmurzyński, Crystal structure of methyl 3-amino-2,3-dideoxy-α-D-arabino-hexopyranoside. Stabilization of the crystal lattice by a double network of N-H...O, O-H...N and O-H...O interactions, Carbohydr. Res. 2005, 340, 2201-2205.
- Wyrzykowski D., Maniecki T,, Pattek-Janczyk A., Stanek J., Warnke Z. Thermal analysis and spectroscopic characteristics of tetrabutylammonium tetrachloroferrate(III), Thermochim. Acta, 2005, 435, 92-98.
- Lee K., Czaplewski C., Kim S.Y., Lee J. An Efficient Molecular Docking Using Conformational Space Annealing. J. Comput. Chem., 2005, 26, 78-87.
- Anusiewicz I., Berdys-Kochańska J., Czaplewski C., Sobczyk M., Daranowski E.M., Skurski P., Simons J. Charge Loss in Gas-Phase Multiply Negatively Charged ligionucleotides , J. Phys. Chem. A, 2005, 109, 240-249.
- Nanias M., Chinchio M., Ołdziej S., Czaplewski C., Scheraga H.A. Protein structure prediction with the UNRES force-field using Replica-Exchange Monte Carlo-with- minimization. Comparison with MCM, CSA, and CFMC., J. Comput. Chem., 2005, 26, 1472-1486.
- Makowska J., Makowski M., Liwo A., Chmurzyński L. Theoretical calculations of homoconjugation equilibrium constants in systems modeling acid base interactions in side chains of biomolecules using the potential of mean force., J. Comput. Chem., 2005, 235-242.
- Liwo A., Khalili M., Scheraga H.A. Ab initio simulations of protein-folding pathways by molecular dynamics with the united-residue model of polypeptide chains., Proc. Natl. Acad. Sci. U.S.A., 2005, 102, 2362-2367.
- Czaplewski C., Liwo A., Ripoll D.R., Scheraga H.A. Molecular origin of anticooperativity in hydrophobic association., J. Phys. Chem. B, 2005, 109, 8108-8119.
- Ołdziej S., Czaplewski C., Liwo A., Chinchio M., Nanias M., Vila J.A., Khalili M., Arnautova Y.A., Jagielska A., Makowski M., Schafroth H.D., Kaźmierkiewicz R., Ripoll D.R., Pillardy J., Saunders J.A., Kang Y.K., Gibson K.D., Scheraga H.A. Physics-based protein-structure prediction using a hierarchical protocol based on the UNRES force field: Assessment in two blind tests. Proc. Natl. Acad. Sci. U.S.A., 2005, 102, 7547-7552.
- Khalili M., Liwo A., Rakowski F., Grochowski P., Scheraga H.A. Molecular dynamics with the united-residue model of polypeptide chains. I. Lagrange equations of motion and tests of numerical stability in the microcanonical mode., J. Phys. Chem. B, 2005, 109, 13785-13797.
- Khalili M., Liwo A., Jagielska A., Scheraga H.A. Molecular dynamics with the united-residue model of polypeptide chains. II. Langevin and Berendsen-bath dynamics and tests on model alpha-helical proteins. J. Phys. Chem. B, 2005, 109, 13798-13810.
- Czaplewski C., Kalinowski S., Liwo A., Scheraga H.A. Comparison of two approaches to potential of mean force calculations of hydrophobic association: particle insertion and weighted histogram analysis methods. Mol. Phys., 2005, 103, 3153-3167.
- Czaplewski C., Kalinowski S., Liwo A., Ripoll D.R., Scheraga H.A. Reply to "Comment on 'Molecular Origin of Anticooperativity in Hydrophobic Association" J. Phys. Chem. B., 2005, 109, 21222-21224.
- Ślusarz M.J., Giełdoń A., Ślusarz R., Trojnar J., Meadows R., Ciarkowski J. Study of new oxytocin antagonist barusiban (Fe200 440) affinity toward human oxytocin receptor versus vasopressin V1a and V2 receptors - molecular dynamics simulation in POPC bilayer., QSAR Comb. Sci, 2005, 24, 603-610.
- Ciarkowski J., Witt M., Ślusarz R. A hypothesis for GPCR activation., 2005, J. Mol. Modeling, 2005, 11, 407-415.
- Umer A., Ługowska H., Sein-Anand J., Rekowski P., Ruczyński J., Pertusewicz J., Korolkiewicz R.P. The Contractile effcts of several sustituted short analogues of porcine galanin in isolated rat jejunal and colonic smooth muscle strips., Pharmacol. Res., 2005, 52, 283-289.
- Ruczyński J., Konstański Z., Cybal M., Pertusewicz J., Wójcikowski C., Rekowski P., Kamińska B. Synthesis and Biological Properties of Chimeric Galanin Analogue GAL(1-13)-[Ala10,11]ET-1(6-21)-NH2, J.Physiol.Pharmacol., 2005, 56, 273-285.
- Kamysz W., Królicka A., Bogucka K., Ossowski T., Łukasiak J., Łojkowska E. Antybacterial Activity of Synthetic Peptides Against Plant Pathogenic Pectobacterium Species. J. Phytopathology, 2005, 153, 313-317.
- Kira J., Łęska B., Schroeder G., Przybylski P., Brzezinski B. Potentiometric and AM1d studies of silicon podants - silver(I) complexes., J. Mol. Struct., 2005, 735, 227-231.
- Kira, J. Łęska B., Nevecheriya O., Schreoedre G., Przybylski P., Brzezinski B. Potentiometric and AM1d studiees of silikon and phosphorous podant -silver )I) complexes., J. Mol. Struct., 2005, 735, 227-231.
- Dabkowska I., Gutowski M., Rak J. Interection with Glycine Increases the Stability Tautomeric of Uracyl., J. Am. Chem. Soc., 2005, 127, 2238-2248.
- Dabkowska I., Valdes H., Jurecka P. Stabilization Energie of the Hydrogen Bondem and sStacted Structures of nucleic Acid base pairs in the Crystal Geometrie of GC, At nad DNA Steps and in the NMR Geometry of the 5'-d(DCGAAGC)-3'Hairpin: Complete Bases Set Calculations At MP2 nad CCGSD(T) Levels., J. Phys Chem. A., 2005, 109, 1131-1136.
- Radisic D., Bowen K.H., Jr., Dąbkowska I., Storoniak P., Rak J., Gutowski M. AT Base Pair Anions versus. (9-Methyl-A)(1-Methyl-T) Base Pair Anions., J. Am. Chem. Soc., 2005, 127, 6443-6450.
- Dąbkowska I., Jurecka P., Hobza P. On Geometries of Stacked and H-bonded Nucleic Acid Base Pairs Determined at Various DFT, MP2 and CCSD(T) Levels up to the CCSD(T)/Complete Basis Set Limit Level. J. Chem. Phys., 2005, 122, 204322.
- Raczyńska E.D., Rudka T., Darowska M., Dąbkowska I., Decouzon M., Gal J-F., Maria P-C., Poliart D.C. Experimental (FT-ICR) and theoretical (DFT) estimation of basic site preference for bidentate 2-(β-aminoethyl)-pyridine - similarity with histamine., J. Phys. Org. Chem., 2005, 18(8), 856-863.
- Bachorz R.A., Harańczyk M., Dąbkowska I., Rak J., Gutowski M. Anion of the Formic Acid Dimer as a Model for Intermolecular Proton Transfer Induced by a π* Excess Electron J. Chem. Phys., 2005, 122, 204304.
- DąbkowskaI., Rak J., Gutowski M. DNA Strand Breaks Induced by Concerted Interaction of H radicals and Low Energy Electrons., I. Eur. Phys. J. D,, 2005, 35, 429-431.
- Strumińska D.I., Skwarzec B., Mazurek-Pawlukowska M., Plutonium isotopes 238Pu, 239+240Pu and 241Pu in Baltic Sea ecosystem, Nukleonika, 2005, 50 (S1), 45-48.
- Niewiada A., Nawrot J., Szafranek J., Szafranek B., Synak E., Jeleń H., Wąsowicz E. Some factors affecting egg-laying of the granary weevil (Sitophilus granarius L.). J. Stor. Prod. Res., 2005, 41, 544-555.
- Szafranek B., Chrapkowska K., Pawińska M., Szafranek J. Analysis of Leaf Surface Sesquiterpenes in Potato Varieties., J. Agric. Food Chem., 2005, 53, 2817-2822.
- Szafranek J., Szafranek B., Synak E., Waligóra D., Chrapkowska K., Czerwicka M., Maliński E. Potato (Solanum tuberosum) surface compounds affecting Colorado potato beetle Leptinotarsa decemlineata) feeding., Polish Journal of Environmental Studies, 2005, 14, Suppl. III, Safe and Environmentally Friendly Agrochemicals, 85-88.
- Szafranek J., Czerwicka M., Kumirska J., Paszkiewicz M., Łojkowska E. Repeating unit structure of Enterobacter sakazakii ZORB 741 O-Polysaccharide., Polish J. Chem., 2005, 79, 287-295.
- Oleksiewicz M.B., Stadejek T., Maćkiewicz Z., Porowski M., Pejsak Z. Discriminating between serological responses to European-genotype live vaccine and European-genotype field strains of porcine reproductive and respiratory syndrome virus (PRRSV) by peptide ELISA., 2005, J. Virol. Methods, 2005, 129(2), 134-144.
- Kamysz E., Jackiewicz-Barańska D., Maćkiewicz Z., Łobocki L., Kochańska B., Ochocińska J. The influence of pH on stability of synthetic statherin in whole saliwa., Acta Biochim. Pol., 52, 174.
- Konecko K., Bonna A., Reszka N., Gut-Winiarska M., Mroczka J., Maćkiewicz Z. Synthesis of fragments of hepatitis C virus (HCV) surface antigen from different genotypes and studies of their immunogenicity, Acta Biochim. Pol., 2005, 52, 105.
- Konecko K., Bonna A., Gut-Winiarska M., Maćkiewicz Z., Szewczyk B. Synthesis of Hepatitis C surface antigen region fragments, Central Eur. J. Immunol., 2005, 30, 50.
PUBLIKACJE W CZASOPISAMCH SPOZA LISTY FILADELFIJSKIEJ:
- Pepliński M., Lidzbarski R., Bojanowska I. Ocena stopnia i warunków przebiegu procesu stabilizacji tlenowej osadu ściekowego w oczyszczalni w Tczewie, G. W. i T. S, 2, 2005, 24-28.
- Pepliński M., Bojanowska I. W poszukiwaniu nowych rozwiązań. Branżowy Magazyn Przemysłowy -Ochrona Środowiska, 2005, 279, (2), 43-46.
- Stepnowski P. Selektywna zbiórka odpadów na uczelniach wyższych. Recykling, 2005, 4(52), 14-16.
- Stepnowski P. Odzysk całkowity rozpuszczalników organicznych. Recykling, 2005, 3(51), 26-28.
- Kłonkowski A.M., Kledzik K., Gwiazda M., Orłowska M. Recognition Elements for Metal Ions as Parts of Optical Chemicla Sensors., Annal. Univ. M. Curie-Skłodowska, Sect. AA Chemia, 2005, vol. LX, 311-327.
- Czaja M., Florek A. Biopaliwa- pokarm czy opał?, Chemia w Szkole, 2005, 1, 5-8.
- Kwiatkowski M., Czaja M., Krzymiński K., Florek A., Karawajczyk B. A New Multimedia Chemistry Course for The Post-Secondary School Students in Poland, Actual Questions of Chemistry Education XV, Gaudeamus, Hradec Kralove (Czechy) (ISBN 80-7041-511-8), 2005, 333-337.
- Kamysz W., Florek A. Wykrywanie witaminy C metodą chromatografii cienkowarstwowej., Chemia w szkole, 2005, 3, 233-238.
- Piosik R., Kowalik E. Równowagi kwasowo - zasadowe w przewodzie pokarmowym człowieka. Chemia w Szkole., 5, 291-295.
- Kowalik E, Sylwetki wybitnych oświatowców - Prof. Bolesław Niemierko., Edukacja Ustawiczna Dorosłych., 2005, 4, 109-111.
- Nowacki A. Wiśniewski A. Efekt anomeryczny, Wiadomości Chemiczne, 2005, 7-8(59), 613-638.
- Myszka H., Bednarczyk D. Saponiny steroidowe., Wiadomości Chemiczne, 2005, 59, 3-4.
- Raczyńska, E.D., Makowski M., Górnicka E., Darowska M. Ab Initio Studies on the Preferred Sites of Protonation of Cytisine in the Gas Phase and Water., Int.J.Mol.Sci., 2005, 6, 143-156.
- Makowska J., Bagińska K., Kasprzykowski F., Vila J.A, Jagielska A., Liwo A., Chmurzyński L., Scheraga H.A. Interplay of Charge Distribution and Conformation in Polypeptides. Comparison of Theory and Experiments., Adv.Comp.Met.Sci.Eng., 2005, 4A, 373-376.
- Makowski M., Makowska J., Chmurzyński L. Theoretical Calculations of Homoconjugation Equilibrium Constants in Systems Modeling Acid-Base Interactions in the Side-Chain of Biomolecules Using the Potential of Mean Force., Adv.Comp.Met.Sci.Eng., 2005, 4A, 377-380.
- Ciarkowski J., Drabik P., Grzonka Z., Hruby V., Liwo A., Ołdziej S., Politowska E., Shenderovich M.D. Witt M. From modeling neurohypophyseal hormones to signalling mechanisms in GPCRs., (Proc 28th EPS), M. Flegel, M. Fridkin, Ch. Gilon and J. Slaninova, Eds. European Peptide Society, 2005, 125-128.
- Łągiewka J., Rodziewicz-Motowidło S., Sosnowska R., Stachowiak K., Ołdziej S., Liwo A., Grzonka Z. Investigation of the hCC dimerization mechanism - CD and NMR structural stability studies of the β2-L1-β3 fragment, (Proc 28th EPS), M. Flegel, M. Fridkin, Ch. Gilon and J. Slaninova, Eds. European Peptide Society, 2005, 1029-1030.
- Łodyga-Chruścińska E., Ołdziej S., Micera G., Sanna D., Chruścicki L., Olczak J., Zabrocki J. Impact of tetrazole cis-amide bond surrogate on metallopeptides, (Proc 28th EPS), M. Flegel, M. Fridkin, Ch. Gilon and J. Slaninova, Eds. European Peptide Society, 2005, 896-897.
- I. Liepina, P. Janmey, C. Czaplewski, A. Liwo, Towards gelsolin amyloid formation, (Proc 28th EPS), M. Flegel, M. Fridkin, Ch. Gilon and J. Slaninova, Eds. European Peptide Society, 2005, 740-741.
- Mickiewicz B., Rodziewicz-Motowidło S., Kamysz W., Łukasiak J. Conformational solution studies of a protegrin peptide IB-367 using NMR spectroscopy, (Proc 28th EPS), M. Flegel, M. Fridkin, Ch. Gilon and J. Slaninova, Eds. European Peptide Society, 2005, 515-516.
- Juszczyk P, Kołodziejczyk A., Rodziewicz-Motowidło S., Oleszczuk M., Grzonka Z. Conformational studies (FT-IR, CD, NMR) of 11-28 fragment of beta-amyloid peptide and its E22K mutant, (Proc 28th EPS), M. Flegel, M. Fridkin, Ch. Gilon and J. Slaninova, Eds. European Peptide Society, 2005, 459-460.
- Kamysz W., Rodziewicz-Motowidło S., Turecka K., Prokopowicz M. The antibacterial activity of Temporin A and its analogues against strains used for the evaluation of preservatives, (Proc 28th EPS), M. Flegel, M. Fridkin, Ch. Gilon and J. Slaninova, Eds. European Peptide Society, 2005, 459-460.
- Strumińska D.I., Skwarzec B., Izotopy plutonu 238Pu, 239+240Pu i 241Pu w środowisku Morza Bałtyckiego, Procedings Krajowe Sympozjum "Technika jądrowa w przemyśle, medycynie, rolnictwie i ochronie środowiska", Kraków, 7-9 września 2005, ISBN-83-921064-2-3, 2005, 97-102.
- Strumińska D.I., Skwarzec B., Mazurek M., Metodyka oznaczania form chemicznych plutonu w środowisku morskim, Procedings Krajowe Sympozjum "Technika jądrowa w przemyśle, medycynie, rolnictwie i ochronie środowiska", Kraków, 7-9 września 2005, ISBN-83-921064-2-3, 2005, 110-114.
- Skwarzec B., Strumińska D.I., Boryło A. Zastosowanie spektrometrii alfa w badaniach przyrody i ochronie środowiska, Procedings Krajowe Sympozjum "Technika jądrowa w przemyśle, medycynie, rolnictwie i ochronie środowiska", Kraków, 7-9 września 2005, ISBN-83-921064-2-3, 2005, 384-387.
- Skwarzec B. Spektrometria alfa w badaniach środowiska przyrodniczego, Analityka, 1, 2005, 24-25.
- Szafranek B., Synak E., Szafranek J. Separations of epicuticular waxes from potato leaves and bean seeds by high performance liquid chromatography using light-scattering detector. , Herba Polonica 50, 2005, 89-94.
- Nietupski M., Szafranek B., Ciepielewska D., Synak E., Fornal Ł., Szafranek J. Correlation between bean seed surface lipids and Acanthoscelides Obtectus Say development., Journal of Plant Protection Research, 2005, 45, (2), 125-133.